Index

_

__call__() (MedicalImage method) __init__() (Aggregator method) (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method)

_registry (SliceSpec attribute)

A

Accuracy (class in cyclops.evaluate.metrics) add_model() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method) add_slice_spec() (SliceSpec method) age() (ClinicalShiftApplicator method) agg_by (Aggregator attribute) agg_meta_for (Aggregator attribute)

aggfuncs (Aggregator attribute) Aggregator (class in cyclops.data.aggregate) apply_shift() (ClinicalShiftApplicator method) (SyntheticShiftApplicator method) AUROC (class in cyclops.evaluate.metrics) auroc() (in module cyclops.evaluate.metrics.functional.auroc) average_precision() (in module cyclops.evaluate.metrics.functional.average_precision)

B

binary_accuracy() (in module cyclops.evaluate.metrics.functional.accuracy) binary_auroc() (in module cyclops.evaluate.metrics.functional.auroc) binary_average_precision() (in module cyclops.evaluate.metrics.functional.average_precision) binary_f1_score() (in module cyclops.evaluate.metrics.functional.f_beta) binary_fbeta_score() (in module cyclops.evaluate.metrics.functional.f_beta) binary_noise_shift() (in module cyclops.monitor.synthetic_applicator) binary_precision() (in module cyclops.evaluate.metrics.functional.precision_recall) binary_roc_curve() (in module cyclops.evaluate.metrics.functional.roc) binary_sensitivity() (in module cyclops.evaluate.metrics.functional.sensitivity) binary_specificity() (in module cyclops.evaluate.metrics.functional.specificity) binary_stat_scores() (in module cyclops.evaluate.metrics.functional.stat_scores) BinaryAccuracy (class in cyclops.evaluate.metrics)

BinaryAUROC (class in cyclops.evaluate.metrics) BinaryAveragePrecision (class in cyclops.evaluate.metrics) BinaryF1Score (class in cyclops.evaluate.metrics) BinaryFbetaScore (class in cyclops.evaluate.metrics) BinaryPrecision (class in cyclops.evaluate.metrics) BinaryPrecisionRecallCurve (class in cyclops.evaluate.metrics) BinaryRecall (class in cyclops.evaluate.metrics) BinaryROCCurve (class in cyclops.evaluate.metrics) BinarySensitivity (class in cyclops.evaluate.metrics) BinarySpecificity (class in cyclops.evaluate.metrics) BinaryStatScores (class in cyclops.evaluate.metrics) BinaryTabularClassificationTask (class in cyclops.tasks.classification)

C

cast_storage() (MedicalImage method) ClinicalShiftApplicator (class in cyclops.monitor.clinical_applicator) column_names (SliceSpec attribute) compound_filter() (in module cyclops.data.slicer) custom() (ClinicalShiftApplicator method) cyclops.data module cyclops.data.aggregate module cyclops.data.features module cyclops.data.features.medical_image module cyclops.data.slicer module

cyclops.monitor module cyclops.monitor.clinical_applicator module cyclops.monitor.synthetic_applicator module cyclops.report module cyclops.report.report module cyclops.tasks module cyclops.tasks.classification module

D

data_type (BinaryTabularClassificationTask property) (MultilabelImageClassificationTask property)

decode_example() (MedicalImage method)

E

embed_storage() (MedicalImage method) encode_example() (MedicalImage method) evaluate() (BinaryTabularClassificationTask method) (in module cyclops.evaluate.evaluator) (MultilabelImageClassificationTask method)

evaluate_fairness() (in module cyclops.evaluate.fairness.evaluator) export() (ModelCardReport method)

F

f1_score() (in module cyclops.evaluate.metrics.functional.f_beta) F1Score (class in cyclops.evaluate.metrics) fbeta_score() (in module cyclops.evaluate.metrics.functional.f_beta) FbetaScore (class in cyclops.evaluate.metrics) feature_association_shift() (in module cyclops.monitor.synthetic_applicator) feature_swap_shift() (in module cyclops.monitor.synthetic_applicator) filter_datetime() (in module cyclops.data.slicer)

filter_non_null() (in module cyclops.data.slicer) filter_range() (in module cyclops.data.slicer) filter_string_contains() (in module cyclops.data.slicer) filter_value() (in module cyclops.data.slicer) fit() (Aggregator method) fit_transform() (Aggregator method) flatten() (MedicalImage method) from_json_file() (ModelCardReport class method)

G

gaussian_noise_shift() (in module cyclops.monitor.synthetic_applicator) get_model() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method)

get_slices() (SliceSpec method)

H

hospital_type() (ClinicalShiftApplicator method)

I

imputer (Aggregator attribute)

include_overall (SliceSpec attribute) is_datetime() (in module cyclops.data.slicer)

K

knockout_shift() (in module cyclops.monitor.synthetic_applicator)

L

list_models() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method) list_models_params() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method) load_model() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method) log_citation() (ModelCardReport method) log_dataset() (ModelCardReport method) log_descriptor() (ModelCardReport method) log_fairness_assessment() (ModelCardReport method) log_from_dict() (ModelCardReport method) log_image() (ModelCardReport method)

log_license() (ModelCardReport method) log_model_parameters() (ModelCardReport method) log_owner() (ModelCardReport method) log_performance_metrics() (ModelCardReport method) log_plotly_figure() (ModelCardReport method) log_quantitative_analysis() (ModelCardReport method) log_reference() (ModelCardReport method) log_regulation() (ModelCardReport method) log_risk() (ModelCardReport method) log_use_case() (ModelCardReport method) log_user() (ModelCardReport method) log_version() (ModelCardReport method)

M

MedicalImage (class in cyclops.data.features.medical_image) ModelCardReport (class in cyclops.report.report) models_count (BinaryTabularClassificationTask property) (MultilabelImageClassificationTask property) module cyclops.data cyclops.data.aggregate cyclops.data.features cyclops.data.features.medical_image cyclops.data.slicer cyclops.monitor cyclops.monitor.clinical_applicator cyclops.monitor.synthetic_applicator cyclops.report cyclops.report.report cyclops.tasks cyclops.tasks.classification month() (ClinicalShiftApplicator method) multiclass_accuracy() (in module cyclops.evaluate.metrics.functional.accuracy) multiclass_auroc() (in module cyclops.evaluate.metrics.functional.auroc) multiclass_f1_score() (in module cyclops.evaluate.metrics.functional.f_beta) multiclass_fbeta_score() (in module cyclops.evaluate.metrics.functional.f_beta) multiclass_precision() (in module cyclops.evaluate.metrics.functional.precision_recall) multiclass_precision_recall_curve() (in module cyclops.evaluate.metrics.functional.precision_recall_curve) multiclass_recall() (in module cyclops.evaluate.metrics.functional.precision_recall) multiclass_roc_curve() (in module cyclops.evaluate.metrics.functional.roc) multiclass_sensitivity() (in module cyclops.evaluate.metrics.functional.sensitivity) multiclass_specificity() (in module cyclops.evaluate.metrics.functional.specificity) multiclass_stat_scores() (in module cyclops.evaluate.metrics.functional.stat_scores) MulticlassAccuracy (class in cyclops.evaluate.metrics) MulticlassAUROC (class in cyclops.evaluate.metrics)

MulticlassF1Score (class in cyclops.evaluate.metrics) MulticlassFbetaScore (class in cyclops.evaluate.metrics) MulticlassPrecision (class in cyclops.evaluate.metrics) MulticlassPrecisionRecallCurve (class in cyclops.evaluate.metrics) MulticlassRecall (class in cyclops.evaluate.metrics) MulticlassROCCurve (class in cyclops.evaluate.metrics) MulticlassSensitivity (class in cyclops.evaluate.metrics) MulticlassSpecificity (class in cyclops.evaluate.metrics) MulticlassStatScores (class in cyclops.evaluate.metrics) multilabel_accuracy() (in module cyclops.evaluate.metrics.functional.accuracy) multilabel_auroc() (in module cyclops.evaluate.metrics.functional.auroc) multilabel_f1_score() (in module cyclops.evaluate.metrics.functional.f_beta) multilabel_fbeta_score() (in module cyclops.evaluate.metrics.functional.f_beta) multilabel_precision() (in module cyclops.evaluate.metrics.functional.precision_recall) multilabel_precision_recall_curve() (in module cyclops.evaluate.metrics.functional.precision_recall_curve) multilabel_recall() (in module cyclops.evaluate.metrics.functional.precision_recall) multilabel_roc_curve() (in module cyclops.evaluate.metrics.functional.roc) multilabel_sensitivity() (in module cyclops.evaluate.metrics.functional.sensitivity) multilabel_specificity() (in module cyclops.evaluate.metrics.functional.specificity) multilabel_stat_scores() (in module cyclops.evaluate.metrics.functional.stat_scores) MultilabelAccuracy (class in cyclops.evaluate.metrics) MultilabelAUROC (class in cyclops.evaluate.metrics) MultilabelF1Score (class in cyclops.evaluate.metrics) MultilabelFbetaScore (class in cyclops.evaluate.metrics) MultilabelImageClassificationTask (class in cyclops.tasks.classification) MultilabelPrecision (class in cyclops.evaluate.metrics) MultilabelPrecisionRecallCurve (class in cyclops.evaluate.metrics) MultilabelRecall (class in cyclops.evaluate.metrics) MultilabelROCCurve (class in cyclops.evaluate.metrics) MultilabelSensitivity (class in cyclops.evaluate.metrics) MultilabelSpecificity (class in cyclops.evaluate.metrics) MultilabelStatScores (class in cyclops.evaluate.metrics)

N

num_timesteps (Aggregator attribute)

O

overall() (in module cyclops.data.slicer)

P

Precision (class in cyclops.evaluate.metrics) precision() (in module cyclops.evaluate.metrics.functional.precision_recall) precision_recall_curve() (in module cyclops.evaluate.metrics.functional.precision_recall_curve)

PrecisionRecallCurve (class in cyclops.evaluate.metrics) predict() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method)

R

Recall (class in cyclops.evaluate.metrics) recall() (in module cyclops.evaluate.metrics.functional.precision_recall)

roc_curve() (in module cyclops.evaluate.metrics.functional.roc) ROCCurve (class in cyclops.evaluate.metrics)

S

save_model() (BinaryTabularClassificationTask method) (MultilabelImageClassificationTask method) Sensitivity (class in cyclops.evaluate.metrics) sensitivity() (in module cyclops.evaluate.metrics.functional.sensitivity) set_output() (Aggregator method) sex() (ClinicalShiftApplicator method) slices() (SliceSpec method)

SliceSpec (class in cyclops.data.slicer) spec_list (SliceSpec attribute) Specificity (class in cyclops.evaluate.metrics) specificity() (in module cyclops.evaluate.metrics.functional.specificity) stat_scores() (in module cyclops.evaluate.metrics.functional.stat_scores) StatScores (class in cyclops.evaluate.metrics) SyntheticShiftApplicator (class in cyclops.monitor.synthetic_applicator)

T

tabular_as_aggregated() (in module cyclops.data.aggregate) task_type (BinaryTabularClassificationTask property) (MultilabelImageClassificationTask property) time() (ClinicalShiftApplicator method) time_by (Aggregator attribute)

timestamp_col (Aggregator attribute) timestamp_ffill_agg() (in module cyclops.data.aggregate) timestep_size (Aggregator attribute) train() (BinaryTabularClassificationTask method) transform() (Aggregator method)

V

validate (SliceSpec attribute)

W

window_duration (Aggregator attribute) window_start_time (Aggregator attribute)

window_stop_time (Aggregator attribute) window_times (Aggregator attribute)